STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103715556LOW QUALITY PROTEIN: nitrate regulatory gene2 protein. (732 aa)    
Predicted Functional Partners:
LOC103702563
E3 ubiquitin-protein ligase KEG-like.
   
  0.440
LOC103716443
E3 ubiquitin-protein ligase KEG.
   
  0.440
LOC103701577
Mitochondrial outer membrane import complex protein METAXIN.
    
 
 0.439
LOC103701472
Uncharacterized protein LOC103701472 isoform X1.
    
 0.413
LOC103707053
Uncharacterized protein LOC103707053.
    
 0.413
LOC103713102
Uncharacterized protein LOC103713102 isoform X1.
    
 0.413
LOC103724108
bZIP transcription factor 27.
      
 0.412
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.