STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103715708Xylulose kinase 2. (556 aa)    
Predicted Functional Partners:
LOC103711739
Xylose isomerase.
  
 
 0.988
LOC103700230
Ribulose-phosphate 3-epimerase, chloroplastic isoform X1.
    
 0.945
LOC103710577
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.945
LOC103696410
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1.
  
 
 0.911
LOC103698883
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1.
  
 
 0.911
LOC103718618
Xylulose kinase 2-like.
  
  
 
0.900
LOC103695978
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.857
LOC103696483
Syntaxin-71-like.
  
 
 0.779
LOC103711203
Syntaxin-71-like; Belongs to the syntaxin family.
  
 
 0.779
LOC103714328
Syntaxin-71-like; Belongs to the syntaxin family.
  
 
 0.779
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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