STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103715607Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1074 aa)    
Predicted Functional Partners:
LOC103696345
Heat shock protein 81-1.
     
 0.693
LOC103712435
Heat shock protein 83-like.
     
 0.693
LOC103715800
Heat shock protein 83.
     
 0.693
LOC103722381
Heat shock protein 81-1-like.
     
 0.693
LOC103722384
Heat shock protein 81-1-like.
     
 0.693
LOC103705014
COP9 signalosome complex subunit 2 isoform X1.
      
 0.587
LOC103721862
RNA-binding protein 42.
      
 0.587
LOC103707717
Calcium-transporting ATPase, endoplasmic reticulum-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.460
LOC103721904
Calcium-transporting ATPase 1, endoplasmic reticulum-type-like; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.459
LOC103695607
Uncharacterized protein LOC103695607 isoform X1; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.458
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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