STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103716408Uncharacterized protein LOC103716408. (804 aa)    
Predicted Functional Partners:
LOC103710490
Protein arv1 homolog isoform X1.
      
 0.575
LOC103716191
Plant intracellular Ras-group-related LRR protein 6.
      
 0.532
atp9
ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family.
      
 0.518
LOC103698141
LOW QUALITY PROTEIN: vacuolar protein 8.
      
 0.489
LOC103700158
Uncharacterized protein LOC103700158.
   
  0.489
LOC103703332
B-cell receptor-associated protein 31-like.
   
  0.489
LOC103710587
B-cell receptor-associated protein 31.
   
  0.489
LOC103716158
B-cell receptor-associated protein 29-like.
   
  0.489
LOC103721478
B-cell receptor-associated protein 31-like.
   
  0.489
LOC103707744
Chromatin assembly factor 1 subunit FSM-like.
  
     0.446
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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