STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103716434Protein DECREASED SIZE EXCLUSION LIMIT 1. (403 aa)    
Predicted Functional Partners:
LOC103723308
Mitotic spindle checkpoint protein MAD2.
   
 0.747
LOC103702003
Transcription initiation factor TFIID subunit 9.
    
 0.733
LOC103702412
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.731
LOC103713576
Transcription initiation factor TFIID subunit 6-like.
    
 0.731
LOC103719516
Testis-expressed protein 10 isoform X1.
   
 0.713
LOC103705803
Anaphase-promoting complex subunit 6 isoform X1.
   
 0.707
LOC103715046
LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2.
    
 0.707
LOC103718979
Transcription initiation factor TFIID subunit 1.
   
 0.703
LOC103714988
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.694
LOC103712231
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.687
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.