STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103716905Ubiquitin fusion degradation protein 1 homolog isoform X1. (324 aa)    
Predicted Functional Partners:
LOC103719699
NPL4-like protein.
   
 0.994
LOC103723509
LOW QUALITY PROTEIN: NPL4-like protein.
   
 0.994
LOC103717618
UBX domain-containing protein.
    
 0.943
LOC103715481
Plant UBX domain-containing protein 7-like.
    
 0.943
LOC103719315
Ubiquitin thioesterase OTU1 isoform X1.
   
 
 0.906
LOC103698061
Ubiquitin fusion degradation protein 1 homolog.
  
  
 
0.901
LOC103699601
Ubiquitin fusion degradation protein 1 homolog.
  
  
 
0.900
LOC103720793
Phospholipase A-2-activating protein-like.
   
 
 0.858
LOC103721263
Phospholipase A-2-activating protein-like.
   
 
 0.858
LOC103710234
Probable ubiquitin conjugation factor E4.
    
 
 0.854
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.