STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103717377Ferric reduction oxidase 2-like. (704 aa)    
Predicted Functional Partners:
LOC103710515
Protein kinase PINOID-like.
      
 0.680
LOC103716034
Protein kinase PINOID-like.
      
 0.680
LOC103702125
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
     
 0.590
LOC103720403
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
     
 0.590
LOC103698224
Omega-hydroxypalmitate O-feruloyl transferase-like.
    
 
 0.587
LOC103699014
Omega-hydroxypalmitate O-feruloyl transferase-like.
    
 
 0.587
LOC103703678
Protein kinase PINOID.
      
 0.587
LOC103704759
Omega-hydroxypalmitate O-feruloyl transferase-like.
    
 
 0.587
LOC103708111
Omega-hydroxypalmitate O-feruloyl transferase-like.
    
 
 0.587
LOC103717466
Omega-hydroxypalmitate O-feruloyl transferase-like.
    
 
 0.587
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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