STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103717373Eukaryotic initiation factor 4A-3. (409 aa)    
Predicted Functional Partners:
LOC103695541
RNA-binding protein Y14A-like.
   
 0.994
LOC103708005
RNA-binding protein Y14A-like.
   
 0.994
LOC103709920
RNA-binding protein Y14A-like.
   
 0.994
LOC103704670
Protein mago nashi homolog.
   
 0.964
LOC103713609
Protein mago nashi homolog.
   
 0.964
LOC103719106
Neuroguidin.
 
 
 0.944
LOC103712937
DEAD-box ATP-dependent RNA helicase 56-like isoform X1.
  
0.943
LOC103719228
DEAD-box ATP-dependent RNA helicase 56 isoform X1.
  
0.943
LOC103723556
110 kDa U5 small nuclear ribonucleoprotein component CLO-like.
   
 0.930
LOC103706269
pre-mRNA-splicing factor CWC22 homolog.
    
 0.920
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.