STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103717559SAGA-associated factor 29 homolog A-like. (267 aa)    
Predicted Functional Partners:
LOC103702412
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.969
LOC103702003
Transcription initiation factor TFIID subunit 9.
   
 0.965
LOC103713576
Transcription initiation factor TFIID subunit 6-like.
    
 0.962
LOC103700871
Transcriptional adapter.
    
 0.940
LOC103714915
Transcriptional adapter.
    
 0.940
LOC103706717
SAGA-associated factor 11.
    
 
 0.938
LOC103720564
Transcription initiation factor TFIID subunit 12 isoform X1.
   
 0.933
LOC103707790
Transcription initiation factor TFIID subunit 5 isoform X1.
    
 0.922
LOC103721330
F-box/WD repeat-containing protein 7-like.
    
 0.922
LOC103697462
Transcription initiation factor TFIID subunit 12b-like isoform X1.
   
 0.919
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.