STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103717655Insulin-degrading enzyme-like 1, peroxisomal; Belongs to the peptidase M16 family. (967 aa)    
Predicted Functional Partners:
LOC103697899
ubiquitin-60S ribosomal protein L40.
    
  0.851
LOC103709637
ubiquitin-40S ribosomal protein S27a-like.
    
  0.776
LOC103701036
ubiquitin-40S ribosomal protein S27a.
    
  0.776
LOC103696584
ubiquitin-40S ribosomal protein S27a-like isoform X1.
    
  0.776
LOC103705090
Mitochondrial Rho GTPase.
   
 
  0.587
LOC103707988
Mitochondrial Rho GTPase.
   
 
  0.587
LOC103704474
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
      
 0.563
LOC103705628
2-hydroxyacyl-CoA lyase-like; Belongs to the TPP enzyme family.
     
 0.538
LOC103715163
2-hydroxyacyl-CoA lyase-like; Belongs to the TPP enzyme family.
     
 0.538
LOC103699359
Presenilin-like protein At1g08700.
      
 0.505
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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