STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103717567Pachytene checkpoint protein 2 homolog; Belongs to the AAA ATPase family. (456 aa)    
Predicted Functional Partners:
LOC103723308
Mitotic spindle checkpoint protein MAD2.
   
 
 0.980
LOC103721998
DNA polymerase zeta processivity subunit.
    
 
 0.934
LOC103720627
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
   
 
 0.880
LOC103710190
Exonuclease 1.
  
  
 0.877
LOC103722980
Exonuclease 1.
  
  
 0.877
LOC103710592
Kinetochore protein NUF2 homolog.
   
  
 0.873
LOC103715915
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
 0.840
LOC103711844
Cytochrome c1-2, heme protein, mitochondrial-like.
 
 
  
 0.834
LOC103722292
Cytochrome c1-2, heme protein, mitochondrial-like isoform X2.
 
 
  
 0.829
LOC103705140
Spindle and kinetochore-associated protein 1 homolog.
   
  
 0.824
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.