STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103718005Probable calcium-binding protein CML48. (244 aa)    
Predicted Functional Partners:
LOC103701925
Protein WVD2-like 7 isoform X1.
   
 0.813
LOC103714019
LOW QUALITY PROTEIN: calpain-type cysteine protease ADL1-like; Belongs to the peptidase C2 family.
   
 0.813
LOC103705835
Calpain-type cysteine protease ADL1-like; Belongs to the peptidase C2 family.
   
 0.813
LOC103710739
Putative nitric oxide synthase.
     
 0.656
LOC103701661
Protein transport protein SEC31 homolog B-like.
    
 
 0.575
LOC103716930
Protein transport protein SEC31 homolog B-like.
    
 
 0.575
LOC103719227
Protein transport protein SEC31 homolog B-like.
    
 
 0.575
LOC103698087
Vacuolar-sorting protein BRO1-like.
    
 
 0.521
LOC103719274
Vacuolar-sorting protein BRO1-like.
    
 
 0.521
LOC103718823
Probable calcium-binding protein CML30.
   
  
 0.518
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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