STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103718347PHD finger protein ALFIN-LIKE 1-like. (242 aa)    
Predicted Functional Partners:
LOC103705084
Protein TRAUCO-like.
   
 
 0.565
LOC103719216
Protein TRAUCO-like.
   
 
 0.565
LOC103707770
Protein RBL-like.
    
 
 0.546
LOC103705260
Protein RBL-like.
    
 
 0.546
LOC103704833
Multiple organellar RNA editing factor 1, mitochondrial-like.
    
 
 0.525
LOC103708156
Protein ANTHESIS POMOTING FACTOR 1 isoform X1.
    
 
 0.525
LOC103719890
Protein ANTHESIS POMOTING FACTOR 1 isoform X1.
    
 
 0.525
LOC103711050
LOW QUALITY PROTEIN: multiple organellar RNA editing factor 1, mitochondrial-like.
    
 
 0.525
LOC103722428
Actin-related protein 4; Belongs to the actin family.
    
 
 0.458
LOC103697899
ubiquitin-60S ribosomal protein L40.
    
   0.432
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.