STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103718572cyclin-D5-1-like; Belongs to the cyclin family. (309 aa)    
Predicted Functional Partners:
LOC103712372
Retinoblastoma-related protein-like isoform X1.
    
 0.699
LOC103721997
Retinoblastoma-related protein.
    
 0.699
LOC103710352
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.538
LOC103723248
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.538
LOC103722997
cyclin-H1-1 isoform X1; Belongs to the cyclin family.
    
 0.496
LOC103712231
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 0.489
LOC103703880
Transcription factor E2FB-like.
    
 0.468
LOC103719884
Transcription factor E2FB-like isoform X1.
    
 0.468
LOC103712337
Cyclin-dependent kinase D-1-like; Belongs to the protein kinase superfamily.
    
 0.457
LOC103705913
Cyclin-dependent kinase B1-1-like isoform X1; Belongs to the protein kinase superfamily.
   
 0.450
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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