STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103718449Probable NAD(P)H dehydrogenase (Quinone) FQR1-like 2. (253 aa)    
Predicted Functional Partners:
LOC103703803
2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic isoform X1.
     
  0.900
LOC103702788
LOW QUALITY PROTEIN: uncharacterized protein LOC103702788.
  
 
 0.783
LOC103704649
Argininosuccinate lyase, chloroplastic.
     
 0.483
LOC103702887
Bifunctional riboflavin kinase/FMN phosphatase-like isoform X1.
    
  0.478
LOC103722147
Bifunctional riboflavin kinase/FMN phosphatase-like.
    
  0.478
LOC103724324
Bifunctional riboflavin kinase/FMN phosphatase-like.
    
  0.478
LOC103707307
Bifunctional riboflavin kinase/FMN phosphatase-like isoform X1.
    
  0.478
LOC103698339
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.474
LOC103706873
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.474
LOC103708648
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.474
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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