STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103718612Probable chromo domain-containing protein LHP1. (370 aa)    
Predicted Functional Partners:
LOC103707483
Histone-lysine N-methyltransferase SUVR5 isoform X1.
    
 0.906
LOC103696416
Putative E3 ubiquitin-protein ligase RING1a.
    
 0.813
LOC103707151
Putative E3 ubiquitin-protein ligase RING1a.
    
 0.813
LOC103705331
Putative glycine-rich cell wall structural protein 1.
    
 0.796
LOC103701203
Histone H3; Belongs to the histone H3 family.
    
 0.778
LOC103701779
Histone H3.3-like.
    
 0.778
LOC103701890
WEB family protein At3g02930, chloroplastic-like.
    
 0.778
LOC103702304
Uncharacterized protein LOC103702304.
    
 0.778
LOC103703390
Histone H3; Belongs to the histone H3 family.
    
 0.778
LOC103704985
Histone H3-like.
    
 0.778
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.