STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103718884Chloride channel protein CLC-c-like isoform X1; Belongs to the chloride channel (TC 2.A.49) family. (765 aa)    
Predicted Functional Partners:
LOC103711984
Chloride channel protein.
  
 
 
 0.635
LOC103718879
Sorting nexin 1 isoform X1.
      
 0.517
LOC103698448
Chloride channel protein.
  
 
 
0.511
LOC103711982
Chloride channel protein.
  
 
 
0.511
LOC103712537
LOW QUALITY PROTEIN: BRI1 kinase inhibitor 1-like.
      
 0.412
LOC103718673
BRI1 kinase inhibitor 1-like.
      
 0.412
LOC103719999
cullin-3A-like isoform X1; Belongs to the cullin family.
      
 0.410
LOC103720217
cullin-3A-like; Belongs to the cullin family.
      
 0.410
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.