STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103718956RuvB-like helicase; Belongs to the RuvB family. (475 aa)    
Predicted Functional Partners:
LOC103696462
RuvB-like helicase; Belongs to the RuvB family.
  
0.969
LOC103705922
RuvB-like helicase; Belongs to the RuvB family.
  
0.969
LOC108511261
RuvB-like helicase; Belongs to the RuvB family.
  
0.969
LOC103722428
Actin-related protein 4; Belongs to the actin family.
   
 0.963
LOC103720534
SWR1-complex protein 4.
   
 0.956
LOC103720745
SWR1 complex subunit 2.
    
 0.953
LOC103720578
LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1.
   
 0.953
LOC103702188
INO80 complex subunit C.
    
 
 0.927
LOC103714376
SWR1 complex subunit 6.
    
 
 0.927
LOC103711731
Probable nucleolar protein 5-2 isoform X2.
   
 
 0.892
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.