STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10371924460S ribosomal protein L30. (112 aa)    
Predicted Functional Partners:
LOC103697899
ubiquitin-60S ribosomal protein L40.
   
 0.988
LOC103696386
60S ribosomal protein L39.
   
 0.986
LOC103700960
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.986
LOC103701866
60S ribosomal protein L26-1-like.
   
 0.986
LOC103702308
60S ribosomal protein L31.
   
 0.986
LOC103704648
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.986
LOC103706732
40S ribosomal protein S28.
   
 
 0.986
LOC103712149
60S ribosomal protein L39-like.
   
 0.986
LOC103713997
60S ribosomal protein L26-2-like.
   
 0.986
LOC103717742
60S ribosomal protein L31-like.
   
 0.986
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.