STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103719269DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1177 aa)    
Predicted Functional Partners:
LOC103702683
DNA-directed RNA polymerase I subunit rpa49.
   
 0.999
LOC103713567
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.999
LOC103712849
DNA-directed RNA polymerases I and III subunit rpac1.
  
 0.998
LOC103715114
Swi5-dependent recombination DNA repair protein 1 homolog.
  
 0.998
LOC103722595
Probable DNA-directed RNA polymerase I subunit RPA43 isoform X1.
   
 0.998
LOC103699115
DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 0.993
LOC103696717
pre-rRNA-processing protein TSR1 homolog.
   
 
 0.992
LOC103712943
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
  
    0.992
LOC103723351
DNA-directed RNA polymerases I and III subunit RPAC2.
   
 0.991
LOC103717859
Periodic tryptophan protein 2.
   
 
 0.990
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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