STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103719788Protein SYM1-like; Belongs to the peroxisomal membrane protein PXMP2/4 family. (258 aa)    
Predicted Functional Partners:
LOC103712719
Peroxisome biogenesis factor 10 isoform X1.
   
 
 0.632
LOC103703898
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.604
LOC103696747
Peroxisomal membrane protein PEX16.
     
 0.601
LOC103705120
LOW QUALITY PROTEIN: peroxisome biogenesis protein 19-2-like.
    
 0.548
LOC103711633
Peroxisome biogenesis protein 19-2-like isoform X2.
    
 0.548
LOC103701673
Probable acyl-activating enzyme 17, peroxisomal.
      
 0.519
LOC103713839
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
     
 0.511
LOC103697899
ubiquitin-60S ribosomal protein L40.
   
 
  0.499
LOC103716860
Peroxisome biogenesis protein 3-2-like.
   
 
 0.495
LOC103723476
Peroxisome biogenesis protein 3-1-like.
   
 
 0.495
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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