STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103720331PRELI domain containing protein 3A. (190 aa)    
Predicted Functional Partners:
LOC103724348
Uncharacterized protein At4g33100 isoform X1.
    
 0.986
LOC103724223
Josephin-like protein isoform X1.
      
 0.586
LOC103720298
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.518
LOC103718201
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.518
LOC103707688
Protein-serine/threonine kinase.
      
 0.517
LOC103718873
Uncharacterized protein LOC103718873.
      
 0.517
LOC103720053
Protein-serine/threonine kinase.
      
 0.517
LOC103705793
Phosphatidate cytidylyltransferase, mitochondrial isoform X1.
      
 0.510
LOC103716532
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
    
 
 0.482
LOC103715427
Mitochondrial import receptor subunit TOM9-2-like.
    
 
 0.464
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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