STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103720626Vacuolar protein sorting-associated protein 51 homolog. (772 aa)    
Predicted Functional Partners:
LOC103709815
Vacuolar protein sorting-associated protein 53 A.
    
 0.993
LOC103722248
Vacuolar protein sorting-associated protein 52 A-like isoform X1.
  
 0.980
LOC103723522
Vacuolar protein sorting-associated protein 52 A-like.
   
 0.977
LOC103723112
Vacuolar protein sorting-associated protein 54, chloroplastic isoform X1.
   
 0.954
LOC103719549
Syndetin-like isoform X1.
  
 
 
 0.949
LOC103716995
Syndetin-like isoform X1.
  
 
 
 0.949
LOC103701080
WD repeat-containing protein DWA2 isoform X1.
   
 
 0.924
LOC103710573
Conserved oligomeric Golgi complex subunit 2.
   
 
 0.904
LOC103696001
Syntaxin-52-like isoform X1.
    
 0.900
LOC103703186
Syntaxin-61-like.
    
 0.900
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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