STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103720765Uncharacterized protein LOC103720765. (652 aa)    
Predicted Functional Partners:
LOC103696082
Putative acyl-activating enzyme 19.
    
 0.561
LOC103701015
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.477
LOC103702554
Probable inactive nicotinamidase At3g16190.
  
 0.434
LOC103702553
Probable inactive nicotinamidase At3g16190.
  
 0.434
LOC103702788
LOW QUALITY PROTEIN: uncharacterized protein LOC103702788.
  
 
 0.427
LOC103720523
2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial isoform X2.
  
 
 0.427
LOC103711771
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
 0.406
LOC103697115
Magnesium protoporphyrin IX methyltransferase, chloroplastic.
   
 
 0.405
LOC103711036
Ubiquinone biosynthesis O-methyltransferase, mitochondrial.
   
 
 0.405
LOC103696723
Fumarylacetoacetase.
   
 
 0.400
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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