STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103720672LOW QUALITY PROTEIN: putative vesicle-associated membrane protein 726; Belongs to the synaptobrevin family. (225 aa)    
Predicted Functional Partners:
LOC103723113
Vacuolar protein-sorting-associated protein 33 homolog; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.741
LOC103722345
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 
 0.681
LOC103697631
SNAP25 homologous protein SNAP33-like.
   
 0.575
LOC103704457
SNAP25 homologous protein SNAP33.
   
 0.575
LOC103718177
SNAP25 homologous protein SNAP33-like.
   
 0.573
LOC103709255
SNAP25 homologous protein SNAP33.
   
 0.572
LOC103709254
Paramyosin.
    
 0.571
LOC103705725
Syntaxin-121-like; Belongs to the syntaxin family.
    
 0.513
LOC108511376
Biogenesis of lysosome-related organelles complex 1 subunit 1.
     
 0.512
LOC103708844
Uncharacterized protein LOC103708844 isoform X1.
    
 0.508
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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