STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103721193Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic. (761 aa)    
Predicted Functional Partners:
LOC103711036
Ubiquinone biosynthesis O-methyltransferase, mitochondrial.
   
 0.631
LOC103697115
Magnesium protoporphyrin IX methyltransferase, chloroplastic.
   
 0.604
cox1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
     
 0.499
LOC103719330
Photosynthetic NDH subunit of subcomplex B 1, chloroplastic-like.
   
 
 0.467
LOC103719329
LOW QUALITY PROTEIN: photosynthetic NDH subunit of subcomplex B 1, chloroplastic-like.
   
 
 0.467
LOC103695978
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
  0.461
LOC103706093
Serine/threonine-protein kinase D6PKL2.
      
 0.461
LOC103702550
Probable tocopherol cyclase, chloroplastic.
   
  
 0.435
LOC103704591
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial.
    
 0.430
LOC103718778
Uncharacterized protein LOC103718778 isoform X1.
    
 0.430
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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