STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103721689Mediator of RNA polymerase II transcription subunit 28. (145 aa)    
Predicted Functional Partners:
LOC103719807
Mediator of RNA polymerase II transcription subunit 30.
      
 0.560
LOC103717024
Mediator of RNA polymerase II transcription subunit 23-like.
      
 0.516
LOC103721130
Mediator of RNA polymerase II transcription subunit 23.
      
 0.516
LOC103719183
Mediator of RNA polymerase II transcription subunit 16 isoform X1.
      
 0.515
LOC103707058
Mediator of RNA polymerase II transcription subunit 8.
      
 0.511
LOC103702273
Mediator of RNA polymerase II transcription subunit 18.
      
 0.431
LOC103712881
Mediator of RNA polymerase II transcription subunit 22a.
      
 0.431
LOC103716081
Mediator of RNA polymerase II transcription subunit 34-like.
      
 0.431
LOC103718974
Mediator of RNA polymerase II transcription subunit 34.
      
 0.431
LOC103705974
Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.422
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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