STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103721590Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (280 aa)    
Predicted Functional Partners:
LOC103707354
Berberine bridge enzyme-like 15; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
   
  0.661
LOC103719629
Berberine bridge enzyme-like 15; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
   
  0.661
LOC103716997
Caffeic acid 3-O-methyltransferase-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
   
 
  0.655
LOC103702778
Probable cinnamyl alcohol dehydrogenase 1.
     
  0.650
LOC103703526
Putative cinnamyl alcohol dehydrogenase 4 isoform X1.
     
  0.650
LOC103719587
Probable cinnamyl alcohol dehydrogenase 6 isoform X1.
     
  0.650
LOC103702563
E3 ubiquitin-protein ligase KEG-like.
   
  0.440
LOC103716443
E3 ubiquitin-protein ligase KEG.
   
  0.440
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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