STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103722012Uncharacterized protein LOC103722012 isoform X1. (96 aa)    
Predicted Functional Partners:
LOC103704112
elongin-C; Belongs to the SKP1 family.
   
 0.973
LOC103722650
elongin-C-like; Belongs to the SKP1 family.
   
 0.973
LOC103701991
RING-box protein 1a-like.
   
 0.956
LOC103711519
RING-box protein 1a.
   
 0.956
LOC103720002
Uncharacterized protein LOC103720002.
    
 0.928
LOC103720445
Uncharacterized protein LOC103720445 isoform X1.
  
  
 
0.901
LOC103698388
Probable transcription factor PosF21.
    
 0.860
LOC103708578
Transcription factor RF2a-like isoform X1.
    
 0.860
LOC103707797
Probable transcription factor PosF21.
    
 0.860
LOC103711146
COP9 signalosome complex subunit 1-like.
   
  0.820
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (10%) [HD]