STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103722250Alpha carbonic anhydrase 7-like. (284 aa)    
Predicted Functional Partners:
LOC103703906
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
     
  0.900
LOC103716896
Ribosome production factor 2 homolog.
   
 
 0.642
LOC103699751
Ribosome production factor 2 homolog.
   
 
 0.642
LOC103708761
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.641
LOC103707235
Peter Pan-like protein.
   
    0.638
LOC103704554
G-box-binding factor 1-like isoform X1.
    
 
 0.633
LOC103719675
60S ribosomal protein L5-1-like.
    
 
 0.633
LOC103721676
Pumilio homolog 24.
   
  
 0.580
LOC103717859
Periodic tryptophan protein 2.
   
    0.579
LOC103716117
U3 small nucleolar RNA-associated protein 18 homolog.
   
  
 0.534
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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