STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103723023IST1-like protein. (551 aa)    
Predicted Functional Partners:
LOC103701862
Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like; Belongs to the AAA ATPase family.
   
 0.824
LOC103714003
Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1; Belongs to the AAA ATPase family.
   
 0.824
LOC103718597
Vacuolar protein sorting-associated protein 24 homolog 1-like.
    
 0.797
LOC103713615
Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5.
   
 
 0.796
LOC103714719
Charged multivesicular body protein 7.
    
 0.722
LOC103718185
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
  
 0.695
LOC103709279
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
  
 0.695
LOC103701198
Autophagy-related protein 13b.
      
 0.690
LOC103710123
ESCRT-related protein CHMP1B.
    
 
 0.673
LOC103719536
ESCRT-related protein CHMP1B-like.
    
 
 0.673
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.