STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103723315Plant UBX domain-containing protein 1-like. (235 aa)    
Predicted Functional Partners:
LOC103717528
Plant UBX domain-containing protein 11.
    
 
 0.800
LOC103717618
UBX domain-containing protein.
    
 
 0.699
LOC103715481
Plant UBX domain-containing protein 7-like.
    
 
 0.699
LOC103705193
Plant UBX domain-containing protein 4-like.
    
 
 0.672
LOC103713060
Plant UBX domain-containing protein 4.
    
 
 0.672
LOC103719699
NPL4-like protein.
   
 
 0.611
LOC103723509
LOW QUALITY PROTEIN: NPL4-like protein.
   
 
 0.611
LOC103696930
Cell division cycle protein 48 homolog.
    
 
 0.513
LOC103703329
Cell division control protein 48 homolog B isoform X1; Belongs to the AAA ATPase family.
    
 
 0.513
LOC103703433
Cell division cycle protein 48 homolog.
    
 
 0.513
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.