STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103723761Uncharacterized protein LOC103723761 isoform X1. (243 aa)    
Predicted Functional Partners:
LOC103720534
SWR1-complex protein 4.
   
 0.888
LOC103720578
LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1.
    
 0.804
LOC103720745
SWR1 complex subunit 2.
    
 0.794
LOC103706776
DNA-directed RNA polymerases II, IV and V subunit 11.
   
 0.793
LOC103702804
Transcription initiation factor IIF subunit beta-like.
   
 0.784
LOC103708197
Transcription initiation factor IIF subunit beta-like.
   
 0.784
LOC103696218
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.776
LOC103722388
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.776
LOC103722428
Actin-related protein 4; Belongs to the actin family.
    
 0.771
LOC103714425
ELL-associated factor 1.
   
 0.762
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (24%) [HD]