STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103702904Gibberellin 20 oxidase 1-D; Belongs to the iron/ascorbate-dependent oxidoreductase family. (383 aa)    
Predicted Functional Partners:
LOC103722719
Gibberellin 3-beta-dioxygenase 1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.938
LOC103717451
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.936
LOC103704193
Uncharacterized protein LOC103704193 isoform X1.
     
0.928
LOC103706434
Ent-kaurenoic acid oxidase-like; Belongs to the cytochrome P450 family.
     
 0.914
LOC103714070
Ent-kaurenoic acid oxidase-like; Belongs to the cytochrome P450 family.
     
 0.914
LOC103697092
Gibberellin 20 oxidase 1-D-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.900
LOC103721482
Gibberellin 2-beta-dioxygenase 2; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.750
LOC103701020
Gibberellin 2-beta-dioxygenase 2-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.745
LOC103709678
Gibberellin 2-beta-dioxygenase 2-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.739
LOC103722469
Gibberellin 2-beta-dioxygenase 3-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.705
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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