STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10370584339S ribosomal protein L41-B, mitochondrial-like. (99 aa)    
Predicted Functional Partners:
LOC103711255
Uncharacterized protein LOC103711255.
   
 
 0.978
LOC103718685
Uncharacterized protein LOC103718685.
   
 
 0.971
LOC103712792
50S ribosomal protein L11, chloroplastic-like; Belongs to the universal ribosomal protein uL11 family.
   
 0.959
LOC103715430
54S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
 0.959
LOC103701946
54S ribosomal protein L51, mitochondrial.
   
 
 0.946
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
   
 
 0.939
rps12-2
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
   
 
 0.939
rps12-3
Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.939
LOC103706747
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.936
LOC103711426
28S ribosomal protein S29, mitochondrial.
    
 
 0.936
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.