STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103707768LOW QUALITY PROTEIN: ATPase family AAA domain-containing protein At1g05910-like. (1207 aa)    
Predicted Functional Partners:
LOC103697396
26S proteasome non-ATPase regulatory subunit 6.
   
 0.917
LOC103708657
26S proteasome non-ATPase regulatory subunit 11 homolog.
   
 0.903
LOC103695978
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.867
LOC103716208
26S proteasome non-ATPase regulatory subunit 8 homolog A.
   
 0.847
LOC103712963
26S proteasome non-ATPase regulatory subunit 12 homolog A isoform X1.
   
 0.824
LOC103719444
26S proteasome non-ATPase regulatory subunit 12 homolog A-like isoform X1.
   
 0.824
LOC103700880
26S proteasome non-ATPase regulatory subunit 4 homolog.
   
 0.822
LOC103706166
26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1.
   
 0.822
LOC103719270
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.814
LOC103701646
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.814
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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