STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103711070Single-stranded DNA-binding protein WHY2, mitochondrial isoform X1. (248 aa)    
Predicted Functional Partners:
LOC103709226
Protein OSB1, mitochondrial-like.
      
 0.513
LOC103714685
DNA repair protein recA homolog 2, mitochondrial; Belongs to the RecA family.
      
 0.513
LOC103716631
DNA repair RAD52-like protein 1, mitochondrial.
      
 0.431
LOC103721294
DNA mismatch repair protein MSH1, mitochondrial isoform X1.
      
 0.431
LOC103696257
DNA repair protein recA homolog 1, chloroplastic; Belongs to the RecA family.
      
 0.414
LOC103714527
Single-stranded DNA-binding protein, mitochondrial.
      
 0.414
LOC103696852
Protein TRI1-like.
      
 0.410
LOC103723937
DNA repair protein recA homolog 3, mitochondrial; Belongs to the RecA family.
      
 0.408
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.