STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103711323Type I inositol polyphosphate 5-phosphatase 8-like. (519 aa)    
Predicted Functional Partners:
LOC103723574
Phosphoinositide phosphatase SAC6-like.
 
  
 
 0.913
LOC103709488
Phosphoinositide phosphatase SAC8 isoform X1.
 
  
 
 0.879
LOC103703895
pre-mRNA-processing factor 19-like.
    
   0.428
LOC103715421
pre-mRNA-processing factor 19-like.
    
   0.428
LOC103699836
Uncharacterized protein LOC103699836.
    
   0.428
LOC103722490
LOW QUALITY PROTEIN: photosystem II stability/assembly factor HCF136, chloroplastic-like.
     
 0.415
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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