STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103714664Uncharacterized protein LOC103714664 isoform X1. (223 aa)    
Predicted Functional Partners:
LOC103695809
Uncharacterized protein LOC103695809.
   
 
 0.745
LOC108511698
Uncharacterized protein LOC108511698.
   
 
 0.745
LOC103719332
Uncharacterized protein LOC103719332.
   
 
 0.745
LOC103721438
Uncharacterized protein LOC103721438.
   
 
 0.745
LOC103702532
ABC transporter E family member 2-like isoform X1.
    
 
 0.685
LOC103715579
ABC transporter E family member 2.
    
 
 0.685
LOC103718320
ABC transporter E family member 2-like.
    
 
 0.685
LOC103708995
NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of the anamorsin/DRE2 homolog. Belongs to the NADPH-dependent diflavin oxidoreductase NDOR1 family. In the N-terminal section; belongs to the flavodoxin family.
      
 0.512
LOC103721891
MMS19 nucleotide excision repair protein homolog.
      
 0.508
LOC103722808
LOW QUALITY PROTEIN: protein NAR1; Belongs to the NARF family.
      
 0.508
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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