STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103712256Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-like isoform X1. (383 aa)    
Predicted Functional Partners:
LOC103701351
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.998
LOC103719942
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.998
LOC103705945
2-oxoglutarate dehydrogenase, mitochondrial-like.
  
 0.976
LOC103710784
2-oxoglutarate dehydrogenase, mitochondrial-like.
  
 0.976
LOC103702977
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.970
LOC103703821
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.970
LOC103713328
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.970
LOC103714530
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.970
LOC103717623
Putative aconitate hydratase, cytoplasmic isoform X1.
  
 0.970
LOC103723130
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.970
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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