STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103717365ATPase family AAA domain-containing protein 1-B-like isoform X1; Belongs to the AAA ATPase family. (386 aa)    
Predicted Functional Partners:
LOC103703898
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.752
LOC103718597
Vacuolar protein sorting-associated protein 24 homolog 1-like.
   
 0.742
LOC103706467
Protein OS-9 homolog isoform X1.
    
 0.725
LOC103719315
Ubiquitin thioesterase OTU1 isoform X1.
    
 0.724
LOC103713721
Ataxin-3 homolog.
   
 0.723
LOC103713839
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
     
 0.715
LOC103696747
Peroxisomal membrane protein PEX16.
     
 0.708
LOC103719699
NPL4-like protein.
    
 0.684
LOC103723509
LOW QUALITY PROTEIN: NPL4-like protein.
    
 0.684
LOC103706521
Alpha-soluble NSF attachment protein-like.
    
 0.683
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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