STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103704995CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (613 aa)    
Predicted Functional Partners:
LOC103709625
Venom phosphodiesterase 2-like.
     
 0.900
LOC103710776
aspartate--tRNA ligase, chloroplastic/mitochondrial.
  
 
 0.850
LOC103704121
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 0.843
LOC103697558
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 0.843
LOC103704602
Nucleoside diphosphate kinase.
  
 
 0.828
LOC103710799
Nucleoside diphosphate kinase.
  
 
 0.828
LOC103712527
Nucleoside diphosphate kinase.
  
 
 0.828
LOC103714193
Nucleoside diphosphate kinase.
  
 
 0.828
LOC103709541
Nucleoside diphosphate kinase.
  
 
 0.828
LOC103714470
Nucleoside diphosphate kinase.
  
 
 0.828
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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