STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103722784LIMR family protein At5g01460-like isoform X1. (511 aa)    
Predicted Functional Partners:
LOC103701335
ABC transporter D family member 1-like.
    
 0.661
LOC103702624
ABC transporter D family member 1-like isoform X1.
    
 0.661
LOC103702981
Uncharacterized protein LOC103702981 isoform X1.
    
 0.661
LOC103705291
ABC transporter D family member 2, chloroplastic-like isoform X1.
    
 0.661
LOC103719950
ABC transporter D family member 1-like isoform X1.
    
 0.661
LOC103711203
Syntaxin-71-like; Belongs to the syntaxin family.
  
     0.506
LOC103714328
Syntaxin-71-like; Belongs to the syntaxin family.
  
     0.494
LOC103720052
Novel plant SNARE 13-like.
  
     0.455
LOC103710767
Novel plant SNARE 11-like isoform X1.
  
     0.428
LOC103714049
Novel plant SNARE 11-like isoform X1.
  
     0.428
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.