STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103695539Heat stress transcription factor A-3-like isoform X1. (616 aa)    
Predicted Functional Partners:
LOC103713516
Calcium-dependent protein kinase 10-like.
    
 0.534
LOC103716834
Calcium-dependent protein kinase 10.
    
 0.534
LOC103709028
N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic-like.
      
 0.519
LOC103716002
Calcium-dependent protein kinase 1-like.
    
 0.516
LOC103709017
Calcium-dependent protein kinase 1-like isoform X1.
    
 0.516
LOC103714144
Cytochrome P450 87A3; Belongs to the cytochrome P450 family.
      
 0.506
LOC103701937
Heat shock 70 kDa protein 17.
    
 0.464
LOC103722921
Small heat shock protein, chloroplastic; Belongs to the small heat shock protein (HSP20) family.
   
  
 0.434
LOC103696345
Heat shock protein 81-1.
    
 0.431
LOC103701676
Heat shock factor-binding protein.
    
 0.431
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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