LOC103695549 protein (Phoenix dactylifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103695549

Uncharacterized protein LOC103695549 isoform X1. (839 aa)

Predicted Functional Partners:

LOC103724295

0.560

LOC103698049

0.552

LOC103698953

0.521

LOC103697798

0.520

LOC103701354

0.441

LOC103713571

0.422

LOC103702315

0.422

LOC103704594

0.416

LOC103724087

0.416

LOC103718780

0.416

Your Current Organism:

Phoenix dactylifera

NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103695549	LOC103697798	A0A3Q0HPI5	A0A2H3X3Y9	Uncharacterized protein LOC103695549 isoform X1.	3-oxo-5-alpha-steroid 4-dehydrogenase 2.	0.520
LOC103695549	LOC103698049	A0A3Q0HPI5	A0A2H3X4K5	Uncharacterized protein LOC103695549 isoform X1.	LOW QUALITY PROTEIN: chloroplastic import inner membrane translocase subunit TIM22-2-like.	0.552
LOC103695549	LOC103698953	A0A3Q0HPI5	A0A2H3X6S8	Uncharacterized protein LOC103695549 isoform X1.	E3 ubiquitin-protein ligase SPL2.	0.521
LOC103695549	LOC103701354	A0A3Q0HPI5	A0A2H3XC74	Uncharacterized protein LOC103695549 isoform X1.	Dynamin-like protein ARC5; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.441
LOC103695549	LOC103702315	A0A3Q0HPI5	A0A3Q0HYJ0	Uncharacterized protein LOC103695549 isoform X1.	Outer envelope protein 80, chloroplastic-like isoform X1.	0.422
LOC103695549	LOC103704594	A0A3Q0HPI5	A0A2H3XMU1	Uncharacterized protein LOC103695549 isoform X1.	ylmG homolog protein 1-2, chloroplastic-like.	0.416
LOC103695549	LOC103713571	A0A3Q0HPI5	A0A2H3YH92	Uncharacterized protein LOC103695549 isoform X1.	Outer envelope protein 80, chloroplastic-like isoform X1.	0.422
LOC103695549	LOC103718780	A0A3Q0HPI5	A0A2H3ZXD9	Uncharacterized protein LOC103695549 isoform X1.	ylmG homolog protein 1-2, chloroplastic-like.	0.416
LOC103695549	LOC103724087	A0A3Q0HPI5	A0A2H3ZH70	Uncharacterized protein LOC103695549 isoform X1.	Uncharacterized protein LOC103724087 isoform X1.	0.416
LOC103695549	LOC103724295	A0A3Q0HPI5	A0A2H3ZH29	Uncharacterized protein LOC103695549 isoform X1.	Uncharacterized protein LOC103724295.	0.560
LOC103697798	LOC103695549	A0A2H3X3Y9	A0A3Q0HPI5	3-oxo-5-alpha-steroid 4-dehydrogenase 2.	Uncharacterized protein LOC103695549 isoform X1.	0.520
LOC103697798	LOC103698049	A0A2H3X3Y9	A0A2H3X4K5	3-oxo-5-alpha-steroid 4-dehydrogenase 2.	LOW QUALITY PROTEIN: chloroplastic import inner membrane translocase subunit TIM22-2-like.	0.515
LOC103697798	LOC103698953	A0A2H3X3Y9	A0A2H3X6S8	3-oxo-5-alpha-steroid 4-dehydrogenase 2.	E3 ubiquitin-protein ligase SPL2.	0.514
LOC103697798	LOC103724295	A0A2H3X3Y9	A0A2H3ZH29	3-oxo-5-alpha-steroid 4-dehydrogenase 2.	Uncharacterized protein LOC103724295.	0.516
LOC103698049	LOC103695549	A0A2H3X4K5	A0A3Q0HPI5	LOW QUALITY PROTEIN: chloroplastic import inner membrane translocase subunit TIM22-2-like.	Uncharacterized protein LOC103695549 isoform X1.	0.552
LOC103698049	LOC103697798	A0A2H3X4K5	A0A2H3X3Y9	LOW QUALITY PROTEIN: chloroplastic import inner membrane translocase subunit TIM22-2-like.	3-oxo-5-alpha-steroid 4-dehydrogenase 2.	0.515
LOC103698049	LOC103698953	A0A2H3X4K5	A0A2H3X6S8	LOW QUALITY PROTEIN: chloroplastic import inner membrane translocase subunit TIM22-2-like.	E3 ubiquitin-protein ligase SPL2.	0.517
LOC103698049	LOC103724295	A0A2H3X4K5	A0A2H3ZH29	LOW QUALITY PROTEIN: chloroplastic import inner membrane translocase subunit TIM22-2-like.	Uncharacterized protein LOC103724295.	0.518
LOC103698953	LOC103695549	A0A2H3X6S8	A0A3Q0HPI5	E3 ubiquitin-protein ligase SPL2.	Uncharacterized protein LOC103695549 isoform X1.	0.521
LOC103698953	LOC103697798	A0A2H3X6S8	A0A2H3X3Y9	E3 ubiquitin-protein ligase SPL2.	3-oxo-5-alpha-steroid 4-dehydrogenase 2.	0.514