STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103695658GPI transamidase component PIG-T homolog. (566 aa)    
Predicted Functional Partners:
LOC103709585
LOW QUALITY PROTEIN: putative GPI-anchor transamidase.
   
 0.999
LOC103712409
LOW QUALITY PROTEIN: GPI transamidase component PIG-S.
   
 0.999
LOC103721849
Glycosylphosphatidylinositol anchor attachment 1 protein isoform X1.
  
 0.999
LOC103704630
Phosphatidylinositol glycan anchor biosynthesis class U protein-like isoform X1.
   
 0.998
LOC103702377
LOW QUALITY PROTEIN: uncharacterized protein LOC103702377.
    
 0.957
LOC103704937
Phosphatidylinositol-glycan biosynthesis class F protein.
     
 0.954
LOC103697338
GPI ethanolamine phosphate transferase 3-like.
    
 0.951
LOC103712896
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 
 0.596
LOC103719617
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
    
 
 0.594
LOC103704672
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; Part of the complex catalyzing the transfer of N- acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.
    
 
 0.586
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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