STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103696405LOW QUALITY PROTEIN: probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial. (384 aa)    
Predicted Functional Partners:
LOC103711199
Probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial.
 
   
 0.786
LOC103715489
Probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial isoform X1.
 
   
 0.784
LOC103701142
Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2, mitochondrial isoform X1.
 
   
 0.765
LOC103701596
2-dehydro-3-deoxyphosphooctonate aldolase.
 
   
 0.760
LOC103721331
Uncharacterized protein LOC103721331.
    
 0.760
LOC103723805
EKC/KEOPS complex subunit bud32.
    
 0.760
LOC103720489
Probable tetraacyldisaccharide 4'-kinase, mitochondrial isoform X1.
  
   
 0.753
LOC103720845
3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like isoform X1.
 
   
 0.750
LOC103721698
3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like.
 
   
 0.749
LOC103716154
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
    
 0.743
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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