STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103697168Ferric reduction oxidase 8, mitochondrial isoform X1. (708 aa)    
Predicted Functional Partners:
LOC103696384
LOW QUALITY PROTEIN: probable L-gulonolactone oxidase 6.
      
 0.516
LOC103711660
DNA mismatch repair protein MSH4.
   
  
 0.475
LOC103719648
Protein WVD2-like 7.
     
 0.459
LOC103721578
Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
     
 0.459
LOC103695712
Pentatricopeptide repeat-containing protein At1g03540.
   
  
 0.433
LOC103710540
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
      
 0.428
LOC103706800
Vacuolar iron transporter 1.1.
      
 0.420
LOC103711119
Vacuolar iron transporter 1.1-like.
      
 0.420
LOC103700495
Transcription factor BHLH062-like.
      
 0.418
LOC103717371
Probable metal-nicotianamine transporter YSL9 isoform X1.
      
 0.412
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.