STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103723908Uncharacterized protein LOC103723908. (211 aa)    
Predicted Functional Partners:
LOC103713132
DExH-box ATP-dependent RNA helicase DExH10.
   
 
 0.740
LOC103720870
DExH-box ATP-dependent RNA helicase DExH9.
   
 
 0.740
LOC103713039
DExH-box ATP-dependent RNA helicase DExH15 chloroplastic.
   
 
 0.473
LOC103713726
DExH-box ATP-dependent RNA helicase DExH11 isoform X1.
   
 
 0.473
LOC103697132
Exosome complex component RRP45A-like.
   
 
 0.468
LOC103702040
Translation machinery-associated protein 22.
   
 
 0.444
LOC103706955
Exosome complex component CSL4 isoform X1.
   
  
 0.444
LOC103712043
Uncharacterized protein At1g27050.
   
 
 0.443
LOC103697050
Uncharacterized protein LOC103697050 isoform X1.
   
 
 0.442
LOC103704448
Uncharacterized protein LOC103704448.
   
 
 0.442
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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