STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103724090Protein SHOOT GRAVITROPISM 6. (1681 aa)    
Predicted Functional Partners:
LOC103720003
RING-type E3 ubiquitin transferase.
      
 0.518
LOC103697878
Uncharacterized protein LOC103697878 isoform X1.
      
 0.515
LOC103704723
dnaJ homolog subfamily C GRV2-like.
      
 0.512
LOC103714569
dnaJ homolog subfamily C GRV2.
      
 0.512
LOC103710972
Uncharacterized protein LOC103710972.
      
 0.468
LOC103716003
Uncharacterized protein LOC103716003.
  
     0.456
LOC103696426
Protein MODIFIER OF SNC1 1-like.
  
     0.447
LOC103708367
Uncharacterized protein LOC103708367.
  
     0.447
LOC103716970
LOW QUALITY PROTEIN: uncharacterized protein LOC103716970.
  
     0.438
LOC103704974
Protein GAMETE EXPRESSED 1.
      
 0.431
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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